Table 1

Amino acid sequences

System
PDB code
Sequence

Trp-cage
1L2Y
NLYIQ WLKDG GPSSG RPPPS
E6apn1
1RIJ
Ac-ALQEL LGQWL KDGGP SSGRP PPS-NH2
C

Ac-KETAA AKFER AHA-NH2
EK

Ac-YAEAA KAAEA AKAF-NH2
Fs

Suc-AAAAA AAARA AAARA AAARA A-NH2
GCN4tp
2OVN
NYHLE NEVAR LKKLV GE
HPLC-6
1WFA
DTASD AAAAA ALTAA NAKAA AELTA ANAAA AAAAT AR-NH2
Chignolin
1UAO
GYDPE TGTWG
MBH12
1J4M
RGKWT YNGIT YEGR
GB1p

GEWTY DDATK TFTVT E
GB1m2

GEWTY NPATG KFTVT E
GB1m3

KKWTY NPATG KFTVQ E
trpzip1
1LE0
SWTWE GNKWT WK-NH2
trpzip2
1LE1
SWTWE NGKWT WK-NH2
betanova

RGWSV QNGKY TNNGK TTEGR
LLM

RGWSL QNGKY TLNGK TMEGR
beta3s

TWIQN GSTKW YQNGS TKIYT
AB zipper
1U2U
Ac-EVAQL EKEVA QLEAE NYQLE QEVAQ LEHEG-NH2


Ac-EVQAL KKRVQ ALKAR NYALK QKVQA LRHKG-NH2
Top7-CFR
2GJH
ERVRI SITAR TKKEA EKFAA ILIKV FAELG YNDIN VTWDG DTVTV EGQL
GS-α3 W
1LQ7
GSRVK ALEEK VKALE EKVKA LGGGG RIEEL KKKWE ELKKK IEELG GGGEV KKVEE EVKKL EEEIK KL

Suc stands for succinylic acid.

Irbäck et al. PMC Biophysics 2009 2:2   doi:10.1186/1757-5036-2-2

Open Data